STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_2011Hypothetical protein. (154 aa)    
Predicted Functional Partners:
AS9A_0100
PAP2 superfamily protein.
  
     0.660
AS9A_0102
Hypothetical protein.
  
  
 0.625
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
 0.559
AS9A_0844
Phosphoesterase PA-phosphatase -like protein.
 
   
 0.500
AS9A_0101
UbiA family prenyltransferase; Belongs to the UbiA prenyltransferase family.
  
  
 0.440
AS9A_0965
Cytochrome P450.
   
 0.440
AS9A_0982
Cytochrome P450.
   
 0.440
AS9A_1405
Cytochrome P450 monooxygenase.
   
 0.440
AS9A_2259
Hypothetical protein; Belongs to the cytochrome P450 family.
   
 0.440
AS9A_2391
Cytochrome P450 CYP124E1.
   
 0.440
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.