STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
narGPutative nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1234 aa)    
Predicted Functional Partners:
narH
Putative nitrate reductase beta subunit.
 0.999
narJ
Putative nitrate reductase delta subunit.
 
 0.999
AS9A_2095
Respiratory nitrate reductase gamma subunit.
 0.999
narU
Putative nitrite extrusion protein.
 
 
 0.998
nasD
Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.963
nirB
Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.957
AS9A_3757
Nitrite reductase (NAD(P)H), small subunit.
  
 
 0.953
nasE
Nitrite reductase [NAD(P)H] small subunit.
  
 
 0.939
AS9A_1176
Putative 2-nitropropane dioxygenase.
    
  0.902
AS9A_2096
Hypothetical protein.
       0.773
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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