STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_2241Putative gluconate dehydrogenase. (582 aa)    
Predicted Functional Partners:
AS9A_2242
Hypothetical protein.
 
 0.995
AS9A_3492
Gluconate kinase.
     
 0.904
AS9A_2240
Oxidoreductase, aldo/keto reductase family.
     
 0.772
AS9A_1033
Phospholipase C.
 
     0.580
AS9A_2239
ABC transporter-like protein.
       0.576
AS9A_2857
Putative WD-40 repeat protein.
    
 0.560
AS9A_1520
TPR-repeat-containing protein.
    
 0.539
AS9A_1937
Hypothetical protein.
    
 0.539
AS9A_2236
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
 
  
 0.532
AS9A_2237
ABC-type sugar transport system periplasmic component-like protein.
       0.510
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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