STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_2405Beta-lactamase domain protein. (283 aa)    
Predicted Functional Partners:
AS9A_2404
MOSC domain containing protein.
       0.546
AS9A_2169
UDP-glucuronosyl/UDP-glucosyltransferase.
 
     0.545
AS9A_2669
Protein phosphatase.
  
     0.484
soxA
Sarcosine oxidase alpha subunit.
  
 0.471
AS9A_1044
2,4-dienoyl-CoA reductase (NADPH).
  
 0.455
AS9A_1007
Putative ferredoxin--NAD(+) reductase.
   
 0.431
AS9A_2929
Putative FAD-dependent oxidoreductase.
   
 0.431
rubB
Rubredoxin reductase.
   
 0.431
AS9A_1235
Putative membrane protein.
  
     0.427
AS9A_2668
Hypothetical protein.
 
     0.406
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.