STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_2502Putative iron-sulfur cluster-binding protein, rieske family. (346 aa)    
Predicted Functional Partners:
AS9A_2509
Putative glyoxalase family protein.
 
  
 0.950
AS9A_2505
Putative acetolactate synthase, large subunit; Belongs to the TPP enzyme family.
 
     0.947
AS9A_2506
Oxidoreductase, short chain dehydrogenase/reductase family.
 
  
 0.945
AS9A_2507
Oxidoreductase, short chain dehydrogenase/reductase family.
  
 0.936
AS9A_2511
Cupin 2 conserved barrel domain protein.
 
   
 0.908
AS9A_2508
Hydrolase, alpha/beta fold family domain protein.
 
 
 
 0.899
AS9A_2500
Hypothetical protein.
 
    0.858
AS9A_2503
Hypothetical protein.
  
    0.833
AS9A_2510
Putative iron-sulfur oxidoreductase.
 
  
 0.828
AS9A_2513
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.823
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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