STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_2715Amino acid transporter, putative. (517 aa)    
Predicted Functional Partners:
AS9A_2717
Putrescine oxidase.
 
   
 0.693
AS9A_1363
Putative regulator of polyketide synthase expression.
 
     0.659
AS9A_1346
Putative TetR family transcriptional regulator.
 
     0.643
AS9A_2716
Transcriptional regulator, TetR family.
 
     0.622
AS9A_2746
Hypothetical peptidase.
 
     0.608
glgE
Alpha amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
 0.545
aglA
Alpha-glucosidase.
  
 0.545
AS9A_1677
Alpha amylase, catalytic region.
  
 0.545
AS9A_3685
Alpha amylase, catalytic region.
  
 0.545
AS9A_3701
Maltose alpha-D-glucosyltransferase.
  
 0.545
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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