Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AS9A_2829Type III restriction enzyme, res subunit. (532 aa)    
Predicted Functional Partners:
AS9A_2828
Hypothetical protein.
 
  
 0.936
dinG
Putative ATP-dependent DNA helicase DinG.
   
 0.827
AS9A_2826
Hypothetical protein.
     
 0.812
AS9A_2831
Hypothetical protein.
 
    0.803
AS9A_2827
Hypothetical protein.
  
  
 0.796
AS9A_2830
Phosphoadenosine phosphosulfate reductase.
 
     0.784
AS9A_2825
Hypothetical protein.
       0.773
rpoB
DNA-directed RNA polymerase subunit beta 2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.761
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.756
AS9A_2832
Hypothetical protein.
 
     0.708
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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