STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_2995Cytochrome P450. (439 aa)    
Predicted Functional Partners:
AS9A_4425
Non-ribosomal peptide synthetase.
  
 0.985
AS9A_0455
Exopolyphosphatase.
  
 0.983
AS9A_4071
Non-ribosomal peptide synthetase.
  
 0.983
AS9A_0108
Polyketide synthase.
 
 0.954
AS9A_0454
Non-ribosomal peptide synthetase.
  
 0.891
AS9A_2922
Cytochrome P450.
 
  
 0.750
AS9A_2996
Transcriptional regulator.
 
     0.739
AS9A_2259
Hypothetical protein; Belongs to the cytochrome P450 family.
 
  
 0.692
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.672
AS9A_2812
2Fe-2S ferredoxin.
  
 0.652
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.