STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_3003Putative ABC transporter permease/ATP-binding protein. (553 aa)    
Predicted Functional Partners:
AS9A_3002
Bifunctional ABC lipid A exporter.
 
 
0.998
AS9A_4303
ABC transporter-like protein protein.
  
 
 0.924
AS9A_4220
Ferric enterobactin transport ATP-binding protein.
 
  
0.907
AS9A_2407
Glutamate uptake system ATP-binding protein.
    
0.906
pstB
Putative phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.900
AS9A_2085
ABC amino acid transporter, ATPase component.
     
0.900
pstB-3
Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.899
AS9A_3123
Putative iron-siderophore ABC transporter ATP-binding protein.
 
  
0.897
AS9A_0071
Putative ABC transporter permease/ATP-binding protein.
 
 
 
0.825
AS9A_3325
Putative ABC transporter permease/ATP-binding protein.
   
 
 0.801
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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