STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_3114Cyclopropane-fatty-acyl-phospholipid synthase. (442 aa)    
Predicted Functional Partners:
AS9A_3115
Hypothetical protein.
  
 0.997
AS9A_3116
Hypothetical protein.
  
 0.994
AS9A_3112
Hypothetical protein.
     0.975
AS9A_3113
Putative cyclopropane fatty acid synthase.
 
    
0.846
AS9A_3117
Hypothetical protein.
 
     0.704
AS9A_0079
Putative LytR family regulatory protein.
  
    0.602
AS9A_4373
Transcriptional regulator, TetR family.
  
    0.592
AS9A_2778
Hypothetical protein.
 
    
 0.463
AS9A_1050
RNA polymerase sigma-70 factor, ECF subfamily.
     
 0.450
AS9A_1047
Beta-Ig-H3/fasciclin.
 
  
 0.429
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.