STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_3122Putative iron-siderophore ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (330 aa)    
Predicted Functional Partners:
AS9A_3123
Putative iron-siderophore ABC transporter ATP-binding protein.
  
 0.970
AS9A_0130
ABC transporter ATP-binding protein.
  
 0.879
AS9A_4220
Ferric enterobactin transport ATP-binding protein.
  
 0.878
AS9A_2295
Putative ABC transporter ATP-binding protein.
  
 0.871
AS9A_4425
Non-ribosomal peptide synthetase.
  
  
 0.857
AS9A_3062
Iron(III) dicitrate-binding periplasmic protein.
 
  
 0.761
AS9A_3121
Putative iron-siderophore ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
0.760
AS9A_1179
Putative ferric nocobactin-binding protein.
 
  
 0.703
AS9A_3639
Ferric siderophore ABC superfamily ATP binding cassette transporter, binding protein.
 
  
 0.692
AS9A_0545
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
  
 0.681
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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