Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AS9A_3206Two-component system response regulator. (226 aa)    
Predicted Functional Partners:
AS9A_3205
Signal transduction histidine kinase regulating citrate/malate metabolism.
 
 
 0.980
AS9A_4484
Two component system histidine kinase.
 
 0.911
AS9A_3204
Di-and tricarboxylate transporter.
     
 0.659
AS9A_4480
Secreted protein.
 
    0.631
AS9A_4483
Hypothetical protein.
 
    0.616
AS9A_4481
Hypothetical conserved protein.
 
     0.506
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
 
     0.481
AS9A_3203
Hypothetical protein.
       0.472
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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