STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_3321Acyl-CoA dehydrogenase. (382 aa)    
Predicted Functional Partners:
AS9A_3221
Putative electron transfer flavoprotein alpha subunit.
 
 0.820
AS9A_3320
Putative enoyl-CoA hydratase/isomerase family protein.
  
 0.789
AS9A_3322
Acetyltransferase.
  
    0.749
fadB
Fatty oxidation complex alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.707
fadB2
Fatty oxidation complex alpha subunit.
  
 0.707
AS9A_3222
Putative electron transfer flavoprotein beta subunit.
 
 0.683
AS9A_3323
Purine nucleosidase.
  
    0.659
AS9A_0905
Putative acyl-CoA dehydrogenase FadE.
 
   
 0.653
AS9A_3324
Predicted glutathione S-transferase.
  
    0.581
AS9A_3319
Hypothetical protein.
       0.560
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.