STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_3379ABC transporter periplasmic binding protein, thiB subfamily. (355 aa)    
Predicted Functional Partners:
AS9A_3378
ABC-type Fe3+ transport system, permease component.
 
 
 0.993
AS9A_3377
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT.
 
  
 0.977
AS9A_3376
MutT/NUDIX family protein; Belongs to the Nudix hydrolase family.
       0.711
phhB
Pterin-4-alpha-carbinolamine dehydratase.
       0.579
AS9A_2498
Hypothetical protein.
  
     0.531
AS9A_2497
Phosphoesterase.
  
     0.522
AS9A_3381
Hypothetical protein.
     
 0.516
AS9A_3851
Binding-protein-dependent transport systems inner membrane component.
  
  
 0.473
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.