STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metBCystathionine gamma-synthase. (390 aa)    
Predicted Functional Partners:
AS9A_3444
Putative cystathionine beta-synthase.
 0.997
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.979
AS9A_3045
Aminotransferase.
 
 
 0.971
AS9A_1191
Sulfite reductase (Ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.968
metE
Cobalamin-independent methionine synthase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
 
 0.967
AS9A_0369
Cysteine synthase/cystathionine beta-synthase.
 0.965
metX
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
  
 0.955
AS9A_1266
Branched-chain-amino-acid aminotransferase.
  
 0.939
AS9A_3046
Putative nitrate/sulfite reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.939
metY
O-acetylhomoserine (Thiol)-lyase.
 
 
0.939
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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