STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_3792DNA-binding response regulator MtrA. (227 aa)    
Predicted Functional Partners:
mtrB
Sensor histidine kinase MtrB.
 0.999
AS9A_0628
Sensor histidine kinase.
 
 0.963
prrB
Sensor-type histidine kinase prrB.
 
 0.955
lpqB
Lipoprotein LpqB.
     
 0.919
AS9A_4250
Osmosensitive K channel His kinase sensor.
 
 0.898
AS9A_3567
Sensor histidine kinase.
 
 0.880
AS9A_2364
Putative two-component system sensor kinase.
 
 
 0.874
AS9A_3828
Sensor kinase, two-component system.
 
 
 0.787
AS9A_2356
Putative two-component system sensor kinase.
 
 0.727
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.644
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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