STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_3904ABC-2 type transporter. (256 aa)    
Predicted Functional Partners:
AS9A_3905
ABC transporter-like protein protein.
 
  
 0.956
AS9A_3903
Hypothetical protein.
 
     0.903
AS9A_3906
Histidine kinase.
 
    0.849
AS9A_3885
ABC transporter-like protein protein.
 
  
 0.703
AS9A_3907
Two component transcriptional regulator, LuxR family.
 
   
 0.663
AS9A_3908
Putative dehydrogenase.
 
     0.628
AS9A_3901
Hypothetical membrane protein.
 
     0.621
AS9A_0570
Transcriptional regulator, TetR family.
 
     0.592
AS9A_3883
Hypothetical protein.
 
     0.586
AS9A_3902
Putative transcriptional regulator.
       0.562
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.