STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_3976Transcriptional regulator, TetR family. (396 aa)    
Predicted Functional Partners:
AS9A_3977
Hypothetical protein.
       0.723
AS9A_0947
Regulatory protein, TetR.
  
    0.612
AS9A_4249
Phosphate regulon transcriptional regulatory protein PhoB.
   
  
 0.605
AS9A_2291
AraC family transcriptional regulator.
  
    0.604
AS9A_3978
Hypothetical protein.
       0.586
AS9A_1605
Putative GntR family transcriptional regulator.
 
  
 0.582
AS9A_3979
Hypothetical protein.
       0.579
AS9A_0725
Putative transcriptional regulator.
  
     0.577
AS9A_2569
TetR family transcriptional regulator.
  
   
0.554
AS9A_2892
Hypothetical protein.
  
     0.541
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.