STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_4214Transcriptional regulator. (128 aa)    
Predicted Functional Partners:
AS9A_4215
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
   
 0.932
AS9A_2350
Putative glyoxalase/bleomycin resistance protein.
 
    0.804
AS9A_2291
AraC family transcriptional regulator.
 
 
 0.699
AS9A_1479
AraC-family transcriptional regulator.
 
 
 0.682
AS9A_4216
DNA polymerase LigD, polymerase domain protein.
       0.571
AS9A_4213
Hypothetical protein.
       0.548
AS9A_4212
Dehydratase.
     
 0.473
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.