STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_4243Membrane protein. (647 aa)    
Predicted Functional Partners:
AS9A_0148
O-antigen export system.
  
 
 0.930
AS9A_4107
Hypothetical protein.
 
    0.641
AS9A_0456
Transposase IS4 family protein.
  
  
 0.624
AS9A_4242
Vegetative cell wall protein gp1.
       0.576
AS9A_4244
Transcriptional regulator, PadR family.
 
     0.542
glf
UDP-galactopyranose mutase.
  
  
 0.491
AS9A_4409
Transcriptional regulator, MerR family.
  
 
   0.446
pknB
Serine/threonine-protein kinase PknB.
  
 
 0.439
AS9A_1301
Protein kinase.
  
 
 0.439
AS9A_4246
ABC-type transport system, permease protein.
  
    0.434
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.