STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_4373Transcriptional regulator, TetR family. (206 aa)    
Predicted Functional Partners:
AS9A_4372
Hypothetical protein.
 
   
 0.900
AS9A_4370
Hypothetical protein.
 
  
 0.886
AS9A_4327
Hypothetical protein.
 
   
 0.842
AS9A_4366
Glycosyl transferase family 2.
 
     0.835
AS9A_4328
Hypothetical protein.
 
  
 0.817
AS9A_4368
Creatininase.
 
   
 0.799
cobB-3
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
  
  
 0.790
AS9A_0079
Putative LytR family regulatory protein.
   
    0.784
AS9A_0931
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
   
   0.776
AS9A_3648
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
   0.776
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.