STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSG_02228Pre-mRNA splicing factor. (940 aa)    
Predicted Functional Partners:
CPSG_00113
U5 small nuclear ribonucleoprotein component.
   
 0.999
CPSG_01348
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.999
CPSG_06420
Pre-mRNA processing splicing factor 8.
   
 0.999
CPSG_08288
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.
   
 0.999
CPSG_09345
U5 snRNP complex subunit.
   
 0.999
CPSG_00029
Pre-mRNA splicing factor.
   
 0.997
CPSG_03613
DNA binding protein SART-1.
   
 0.995
CPSG_04741
Pre-mRNA splicing factor.
   
 0.994
CPSG_00052
Pre-mRNA splicing factor.
   
 0.993
CPSG_02578
U4/U6 small nuclear ribonucleoprotein.
   
 0.993
Your Current Organism:
Coccidioides posadasii
NCBI taxonomy Id: 443226
Other names: C. posadasii str. Silveira, Coccidioides posadasii str. Silveira
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.