STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSG_02300Rnapii degradation factor def1. (871 aa)    
Predicted Functional Partners:
CPSG_05795
Uncharacterized protein.
    
 0.799
CPSG_05213
WD repeat protein.
   
  0.556
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.547
CPSG_06867
Pre-rRNA-processing protein ipi1.
    
 0.536
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.502
CPSG_06626
CLP1_P domain-containing protein.
    
  0.486
CPSG_00846
CRIB domain-containing protein.
    
  0.471
CPSG_04991
ULP_PROTEASE domain-containing protein.
    
  0.471
CPSG_06907
SNF2 family ATP-dependent chromatin-remodeling factor snf21.
    
  0.471
CPSG_09476
Alpha-actinin.
    
  0.471
Your Current Organism:
Coccidioides posadasii
NCBI taxonomy Id: 443226
Other names: C. posadasii str. Silveira, Coccidioides posadasii str. Silveira
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.