STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSG_0343060S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (202 aa)    
Predicted Functional Partners:
CPSG_01239
60S ribosomal protein L9.
  
 0.999
CPSG_00444
Ribosomal_L28e domain-containing protein.
   
 0.999
CPSG_00705
60S ribosomal protein L23.
  
 0.999
CPSG_00884
Uncharacterized protein.
  
 0.999
CPSG_00078
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.999
CPSG_01322
60S ribosomal protein L35.
  
 0.999
CPSG_02180
60S ribosomal protein L10.
  
 0.999
CPSG_01476
Ribosomal protein L7a.
  
 0.999
CPSG_01507
Ribosomal protein L31e.
   
 0.999
CPSG_02777
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.999
Your Current Organism:
Coccidioides posadasii
NCBI taxonomy Id: 443226
Other names: C. posadasii str. Silveira, Coccidioides posadasii str. Silveira
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.