STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSG_03900WD repeat-containing protein 44. (741 aa)    
Predicted Functional Partners:
CPSG_05626
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
      
 0.515
CPSG_07703
Cytochrome b561 domain-containing protein.
      
 0.442
CPSG_00619
ATP-dependent RNA helicase FAL1.
      
 0.422
CPSG_08179
Cystathionine beta-synthase.
      
 0.420
Your Current Organism:
Coccidioides posadasii
NCBI taxonomy Id: 443226
Other names: C. posadasii str. Silveira, Coccidioides posadasii str. Silveira
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.