STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSG_047703' exoribonuclease. (410 aa)    
Predicted Functional Partners:
CPSG_03902
Exosome subunit Csl4.
   
 0.999
CPSG_04889
Exosome complex subunit Rrp46.
   
 0.999
CPSG_06326
Exosome complex endonuclease 1/ribosomal RNA processing protein.
   
 0.999
CPSG_06595
Exosome complex exonuclease Rrp40.
   
 0.999
CPSG_06757
Exosome complex exonuclease Rrp4.
   
 0.999
CPSG_08023
Exosome complex endonuclease 2/ribosomal RNA processing protein.
   
 0.999
CPSG_08610
3' exoribonuclease.
   
 0.999
CPSG_01158
Exosome complex exonuclease; Belongs to the RNR ribonuclease family.
   
 0.997
CPSG_05059
3' exoribonuclease.
   
 0.997
CPSG_05186
Uncharacterized protein.
   
 0.996
Your Current Organism:
Coccidioides posadasii
NCBI taxonomy Id: 443226
Other names: C. posadasii str. Silveira, Coccidioides posadasii str. Silveira
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.