STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSG_05613AN1 zinc finger protein. (332 aa)    
Predicted Functional Partners:
CPSG_03965
Cell division control protein Cdc48; Belongs to the AAA ATPase family.
    
 
 0.641
CPSG_08194
AAA family ATPase.
    
 
 0.641
CPSG_09790
Ubiquitin.
    
 
 0.526
CPSG_07131
Uncharacterized protein.
    
   0.521
CPSG_07747
Endoplasmic reticulum and nuclear membrane protein c Npl4.
    
   0.512
CPSG_01933
Proteasome regulatory particle subunit.
   
   0.486
CPSG_05463
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 
 0.481
CPSG_08507
Ubiquitin.
    
 
 0.456
CPSG_08508
Uncharacterized protein.
    
 
 0.456
CPSG_03455
Ubiquitin.
    
   0.449
Your Current Organism:
Coccidioides posadasii
NCBI taxonomy Id: 443226
Other names: C. posadasii str. Silveira, Coccidioides posadasii str. Silveira
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.