STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSG_08382BAR domain-containing protein. (306 aa)    
Predicted Functional Partners:
CPSG_05795
Uncharacterized protein.
   
 0.879
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
 
      0.836
CPSG_00888
Ankyrin repeat protein.
   
  0.565
CPSG_07601
NADH-ubiquinone oxidoreductase 299 kDa subunit.
 
  
  0.495
CPSG_06370
Proteasome regulatory particle subunit.
    
  0.467
CPSG_07875
Uncharacterized protein.
    
  0.461
CPSG_00604
Uncharacterized protein.
    
  0.459
CPSG_04588
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
  0.433
CPSG_00858
Uncharacterized protein.
    
  0.431
CPSG_09579
SMT3.
    
  0.423
Your Current Organism:
Coccidioides posadasii
NCBI taxonomy Id: 443226
Other names: C. posadasii str. Silveira, Coccidioides posadasii str. Silveira
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.