STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSG_0850350S ribosomal protein YmL27. (133 aa)    
Predicted Functional Partners:
CPSG_01199
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.995
CPSG_03726
Uncharacterized protein.
   
 
 0.994
CPSG_07940
37S ribosomal protein S12.
   
 
 0.994
CPSG_05491
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.992
CPSG_09617
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.992
CPSG_03738
60S ribosomal protein L19; Belongs to the universal ribosomal protein uL11 family.
   
 0.991
CPSG_03032
50S ribosomal protein L3.
   
  0.990
CPSG_09471
37S ribosomal protein S16.
   
   0.990
CPSG_03907
Mitochondrial ribosomal protein L43.
   
 
 0.989
CPSG_07159
Mitochondrial ribosomal protein L19.
   
 
 0.989
Your Current Organism:
Coccidioides posadasii
NCBI taxonomy Id: 443226
Other names: C. posadasii str. Silveira, Coccidioides posadasii str. Silveira
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.