STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSG_09646Ribosome biogenesis protein Noc4. (551 aa)    
Predicted Functional Partners:
CPSG_00096
Nucleolar protein 14.
   
 0.999
CPSG_01697
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.999
CPSG_02082
HEAT repeat protein.
   
 0.999
CPSG_02651
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
  0.999
CPSG_02444
U3 small nucleolar RNA associated protein.
   
  0.999
CPSG_03529
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
  0.999
CPSG_05128
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
  0.999
CPSG_05254
Nucleolar essential protein 1.
   
 0.999
CPSG_05066
rRNA biogenesis protein RRP5.
   
 0.999
CPSG_06144
Small nucleolar ribonucleoprotein complex subunit.
   
 0.999
Your Current Organism:
Coccidioides posadasii
NCBI taxonomy Id: 443226
Other names: C. posadasii str. Silveira, Coccidioides posadasii str. Silveira
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.