STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX84463.1PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain. (243 aa)    
Predicted Functional Partners:
AEX84575.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
  
  
 0.631
AEX84929.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
  
  
 0.631
AEX84930.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
  
  
 0.631
AEX85908.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
  
  
 0.631
AEX86051.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
  
  
 0.631
AEX85343.1
Hypothetical protein.
  
  
 0.615
msrA
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
    0.595
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
 0.584
AEX85088.1
PFAM: CAAX amino terminal protease family.
  
  
 0.546
AEX85934.1
PFAM: CAAX amino terminal protease family.
  
  
 0.546
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.