Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEX84488.1 | AEX84489.1 | Marpi_0028 | Marpi_0029 | Hypothetical protein; PFAM: Activator of Hsp90 ATPase homolog 1-like protein. | Threonine aldolase; PFAM: Beta-eliminating lyase. | 0.550 |
AEX84488.1 | AEX84490.1 | Marpi_0028 | Marpi_0030 | Hypothetical protein; PFAM: Activator of Hsp90 ATPase homolog 1-like protein. | PFAM: Predicted permease. | 0.550 |
AEX84488.1 | AEX84491.1 | Marpi_0028 | Marpi_0031 | Hypothetical protein; PFAM: Activator of Hsp90 ATPase homolog 1-like protein. | Hypothetical protein. | 0.550 |
AEX84489.1 | AEX84488.1 | Marpi_0029 | Marpi_0028 | Threonine aldolase; PFAM: Beta-eliminating lyase. | Hypothetical protein; PFAM: Activator of Hsp90 ATPase homolog 1-like protein. | 0.550 |
AEX84489.1 | AEX84490.1 | Marpi_0029 | Marpi_0030 | Threonine aldolase; PFAM: Beta-eliminating lyase. | PFAM: Predicted permease. | 0.773 |
AEX84489.1 | AEX84491.1 | Marpi_0029 | Marpi_0031 | Threonine aldolase; PFAM: Beta-eliminating lyase. | Hypothetical protein. | 0.773 |
AEX84489.1 | AEX84913.1 | Marpi_0029 | Marpi_0470 | Threonine aldolase; PFAM: Beta-eliminating lyase. | GTP-binding protein YchF; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF. | 0.857 |
AEX84489.1 | AEX85554.1 | Marpi_0029 | Marpi_1143 | Threonine aldolase; PFAM: Beta-eliminating lyase. | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.928 |
AEX84489.1 | AEX86015.1 | Marpi_0029 | Marpi_1626 | Threonine aldolase; PFAM: Beta-eliminating lyase. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.918 |
AEX84489.1 | AEX86016.1 | Marpi_0029 | Marpi_1627 | Threonine aldolase; PFAM: Beta-eliminating lyase. | Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. | 0.901 |
AEX84489.1 | gcvPA | Marpi_0029 | Marpi_0141 | Threonine aldolase; PFAM: Beta-eliminating lyase. | Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.925 |
AEX84489.1 | gcvPB | Marpi_0029 | Marpi_0140 | Threonine aldolase; PFAM: Beta-eliminating lyase. | Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.925 |
AEX84489.1 | glyA | Marpi_0029 | Marpi_0149 | Threonine aldolase; PFAM: Beta-eliminating lyase. | Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.934 |
AEX84490.1 | AEX84488.1 | Marpi_0030 | Marpi_0028 | PFAM: Predicted permease. | Hypothetical protein; PFAM: Activator of Hsp90 ATPase homolog 1-like protein. | 0.550 |
AEX84490.1 | AEX84489.1 | Marpi_0030 | Marpi_0029 | PFAM: Predicted permease. | Threonine aldolase; PFAM: Beta-eliminating lyase. | 0.773 |
AEX84490.1 | AEX84491.1 | Marpi_0030 | Marpi_0031 | PFAM: Predicted permease. | Hypothetical protein. | 0.948 |
AEX84491.1 | AEX84488.1 | Marpi_0031 | Marpi_0028 | Hypothetical protein. | Hypothetical protein; PFAM: Activator of Hsp90 ATPase homolog 1-like protein. | 0.550 |
AEX84491.1 | AEX84489.1 | Marpi_0031 | Marpi_0029 | Hypothetical protein. | Threonine aldolase; PFAM: Beta-eliminating lyase. | 0.773 |
AEX84491.1 | AEX84490.1 | Marpi_0031 | Marpi_0030 | Hypothetical protein. | PFAM: Predicted permease. | 0.948 |
AEX84913.1 | AEX84489.1 | Marpi_0470 | Marpi_0029 | GTP-binding protein YchF; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF. | Threonine aldolase; PFAM: Beta-eliminating lyase. | 0.857 |
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