STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX84509.1Hypothetical protein; PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase). (356 aa)    
Predicted Functional Partners:
pcp
Pyroglutamyl-peptidase I; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
       0.580
AEX85338.1
ATP-dependent transcriptional regulator; PFAM: Archaeal ATPase; Protein of unknown function (DUF1703).
  
     0.505
AEX85436.1
Type II secretory pathway, component ExeA (predicted ATPase); PFAM: Archaeal ATPase.
  
     0.501
AEX85329.1
ATP-dependent transcriptional regulator; PFAM: Archaeal ATPase; Protein of unknown function (DUF1703).
  
     0.500
AEX86003.1
ATPase; PFAM: Archaeal ATPase; Protein of unknown function (DUF1703).
  
     0.486
AEX84510.1
PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase.
       0.484
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.484
AEX85710.1
PFAM: Protein of unknown function (DUF1703).
  
     0.475
AEX84512.1
DNA repair exonuclease; PFAM: Calcineurin-like phosphoesterase.
       0.469
AEX84513.1
ATPase involved in DNA repair.
       0.469
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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