STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX84526.1Hypothetical protein. (715 aa)    
Predicted Functional Partners:
AEX84523.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain.
       0.838
AEX84527.1
Putative domain HDIG-containing protein; PFAM: HD domain; GAF domain; TIGRFAM: uncharacterized domain HDIG.
       0.799
AEX84524.1
HD-GYP domain-containing protein; PFAM: HD domain.
       0.786
AEX84525.1
PFAM: Protein of unknown function (DUF3307).
       0.786
dnaX
DNA polymerase III, subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.521
AEX84529.1
PFAM: Glycosyl transferase family 2.
       0.490
AEX84522.1
TIGR00153 family protein; PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein.
       0.477
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.410
AEX84531.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.410
AEX84532.1
CDP-diglyceride synthetase; PFAM: Cytidylyltransferase family; Belongs to the CDS family.
       0.410
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.