STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX84752.1Recombinational DNA repair protein (RecE pathway); PFAM: RecT family. (322 aa)    
Predicted Functional Partners:
AEX84751.1
Hypothetical protein.
 
     0.948
AEX84753.1
PFAM: Metallo-beta-lactamase superfamily.
 
     0.933
AEX84754.1
PFAM: Conserved phage C-terminus (Phg_2220_C); TIGRFAM: phage conserved hypothetical protein, C-terminal domain.
  
    0.615
AEX84757.1
PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
     
 0.606
AEX84761.1
Holliday junction resolvase; PFAM: Endodeoxyribonuclease RusA.
       0.585
AEX84756.1
PFAM: DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; manually curated.
       0.563
AEX84758.1
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
       0.558
AEX84750.1
Hypothetical protein.
       0.547
AEX84755.1
Hypothetical protein.
       0.528
AEX84759.1
Hypothetical protein.
       0.528
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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