STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX84775.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
AEX84776.1
PFAM: Phage major capsid protein E.
       0.735
AEX84774.1
Hypothetical protein.
       0.720
AEX84777.1
Hypothetical protein.
       0.551
AEX84778.1
Hypothetical protein.
       0.551
AEX84779.1
Hypothetical protein.
       0.551
AEX84780.1
Hypothetical protein.
       0.551
AEX84781.1
Hypothetical protein.
       0.551
AEX84782.1
Hypothetical protein.
       0.518
AEX84770.1
PFAM: Phage terminase large subunit; TIGRFAM: phage terminase, large subunit, PBSX family.
       0.511
AEX84784.1
PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.
       0.495
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.