STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX84798.1ATPase involved in DNA repair; May be involved in recombinational repair of damaged DNA. (536 aa)    
Predicted Functional Partners:
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
  
 0.862
AEX84799.1
Hypothetical protein.
       0.793
nadK
Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
 0.782
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.771
AEX84801.1
Hypothetical protein; PFAM: DUF218 domain.
       0.682
AEX84589.1
SOS response transcriptional repressor, RecA-mediated autopeptidase; PFAM: Helix-turn-helix; Peptidase S24-like.
  
  
 0.656
AEX85471.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
   
 0.650
AEX84802.1
PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTPase YqeH; small GTP-binding protein domain.
       0.638
AEX84810.1
PFAM: Exonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; Belongs to the XseA family.
 
   
 0.611
AEX84748.1
SOS response transcriptional repressor, RecA-mediated autopeptidase; PFAM: Helix-turn-helix; Peptidase S24-like.
   
  
 0.604
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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