STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX84898.1Hypothetical protein; PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase). (348 aa)    
Predicted Functional Partners:
AEX84897.1
HTH domain-containing protein; PFAM: HTH domain.
       0.675
AEX84899.1
ABC-type transport system involved in Fe-S cluster assembly, permease component; PFAM: Uncharacterized protein family (UPF0051).
       0.570
AEX84900.1
ABC-type transport system involved in Fe-S cluster assembly, ATPase component; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC.
       0.570
AEX84896.1
FAD-dependent dehydrogenase.
       0.501
AEX85338.1
ATP-dependent transcriptional regulator; PFAM: Archaeal ATPase; Protein of unknown function (DUF1703).
  
     0.486
AEX85436.1
Type II secretory pathway, component ExeA (predicted ATPase); PFAM: Archaeal ATPase.
  
     0.482
AEX85329.1
ATP-dependent transcriptional regulator; PFAM: Archaeal ATPase; Protein of unknown function (DUF1703).
  
     0.479
AEX86003.1
ATPase; PFAM: Archaeal ATPase; Protein of unknown function (DUF1703).
  
     0.463
AEX85710.1
PFAM: Protein of unknown function (DUF1703).
  
     0.453
AEX85618.1
Addiction module toxin, RelE/StbE family; PFAM: Plasmid maintenance system killer protein; TIGRFAM: addiction module toxin, RelE/StbE family.
  
     0.437
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.