STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX84920.1Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: Zinc-binding dehydrogenase. (344 aa)    
Predicted Functional Partners:
AEX84926.1
Putative cobalamin binding protein; PFAM: B12 binding domain.
 
 
 0.993
AEX84919.1
PFAM: Prokaryotic protein of unknown function (DUF849).
 
  
  0.992
AEX84925.1
PFAM: D-Lysine 5,6-aminomutase alpha subunit.
 
 
  0.991
AEX84918.1
acyl-CoA hydrolase; PFAM: Thioesterase superfamily.
 
 
   0.949
AEX84923.1
Hypothetical protein.
 
     0.919
AEX85733.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.
 
      0.899
AEX84924.1
Mismatch repair ATPase (MutS family); PFAM: MutS domain V.
 
     0.846
AEX84917.1
PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit.
  
  
 0.769
AEX84916.1
PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit.
  
  
 0.768
AEX84921.1
PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase.
 
     0.724
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.