Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEX85027.1 | AEX85028.1 | Marpi_0586 | Marpi_0587 | Hypothetical protein. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.773 |
AEX85027.1 | AEX85029.1 | Marpi_0586 | Marpi_0588 | Hypothetical protein. | Putative Fe-S center protein; PFAM: 4Fe-4S binding domain. | 0.523 |
AEX85027.1 | AEX85030.1 | Marpi_0586 | Marpi_0589 | Hypothetical protein. | Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase. | 0.523 |
AEX85028.1 | AEX85027.1 | Marpi_0587 | Marpi_0586 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | Hypothetical protein. | 0.773 |
AEX85028.1 | AEX85029.1 | Marpi_0587 | Marpi_0588 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | Putative Fe-S center protein; PFAM: 4Fe-4S binding domain. | 0.523 |
AEX85028.1 | AEX85030.1 | Marpi_0587 | Marpi_0589 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase. | 0.523 |
AEX85029.1 | AEX85027.1 | Marpi_0588 | Marpi_0586 | Putative Fe-S center protein; PFAM: 4Fe-4S binding domain. | Hypothetical protein. | 0.523 |
AEX85029.1 | AEX85028.1 | Marpi_0588 | Marpi_0587 | Putative Fe-S center protein; PFAM: 4Fe-4S binding domain. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.523 |
AEX85029.1 | AEX85030.1 | Marpi_0588 | Marpi_0589 | Putative Fe-S center protein; PFAM: 4Fe-4S binding domain. | Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase. | 0.787 |
AEX85030.1 | AEX85027.1 | Marpi_0589 | Marpi_0586 | Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase. | Hypothetical protein. | 0.523 |
AEX85030.1 | AEX85028.1 | Marpi_0589 | Marpi_0587 | Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.523 |
AEX85030.1 | AEX85029.1 | Marpi_0589 | Marpi_0588 | Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase. | Putative Fe-S center protein; PFAM: 4Fe-4S binding domain. | 0.787 |