STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85071.1Putative flavoprotein; PFAM: Metallo-beta-lactamase superfamily. (255 aa)    
Predicted Functional Partners:
AEX85070.1
PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.
     
 0.800
AEX85072.1
Hypothetical protein; PFAM: LVIVD repeat.
       0.701
AEX84559.1
PFAM: Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin ferrous iron-binding domain.
  
  
 0.656
AEX85730.1
Putative dehydrogenase; PFAM: BFD-like [2Fe-2S] binding domain; FAD dependent oxidoreductase.
  
  
 0.526
AEX85073.1
PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family.
       0.488
AEX85074.1
PFAM: Acylphosphatase.
       0.455
AEX85075.1
Putative AP superfamily protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
       0.439
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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