STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85127.1Thermostable 8-oxoguanine DNA glycosylase. (208 aa)    
Predicted Functional Partners:
AEX85128.1
Uncharacterized membrane protein, possible Na+ channel or pump; PFAM: Protein of unknown function (DUF554).
       0.752
AEX85126.1
PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
       0.709
AEX85129.1
Conserved protein of unknown function BmrU; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family.
       0.690
AEX85125.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
       0.637
AEX84485.1
Putative redox protein, regulator of disulfide bond formation; PFAM: Bacterial regulatory protein, arsR family; SirA-like protein; Belongs to the sulfur carrier protein TusA family.
  
     0.526
AEX85130.1
PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein.
       0.520
AEX85131.1
TIGRFAM: anaerobic ribonucleoside-triphosphate reductase.
       0.520
AEX86207.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2194).
  
     0.454
AEX86076.1
TIGRFAM: Glutaredoxin-like domain protein.
  
     0.446
queH
Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).
 
     0.438
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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