STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85179.1Periplasmic component of the Tol biopolymer transport system; PFAM: WD40-like Beta Propeller Repeat. (393 aa)    
Predicted Functional Partners:
AEX85180.1
PFAM: Yqey-like protein.
       0.780
AEX86041.1
Hypothetical protein.
  
 
 0.755
AEX86255.1
Hypothetical protein.
  
  
 0.687
AEX85769.1
Hypothetical protein.
   
 
 0.608
AEX85997.1
Hypothetical protein.
   
 
 0.608
AEX85181.1
PFAM: Bacterial regulatory proteins, tetR family.
       0.525
AEX85182.1
2-nitropropane dioxygenase-like enzyme; PFAM: 2-nitropropane dioxygenase; manually curated; non-canonical start codon.
       0.488
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
    0.460
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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