STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85199.1PFAM: Papain family cysteine protease. (488 aa)    
Predicted Functional Partners:
AEX85198.1
Hypothetical protein.
       0.798
AEX86355.1
PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family.
    
 
 0.735
AEX85694.1
Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase.
  
  
 0.638
AEX85200.1
Hypothetical protein.
       0.603
AEX85197.1
PFAM: Fibronectin type III domain.
 
     0.535
AEX84862.1
Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin.
  
  
 0.440
AEX85387.1
PFAM: 4Fe-4S binding domain.
  
     0.412
AEX85117.1
Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase.
  
  
 0.407
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.