STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85389.1Hypothetical protein; PFAM: Dinitrogenase iron-molybdenum cofactor. (114 aa)    
Predicted Functional Partners:
AEX85390.1
P-loop ATPase, MinD superfamily; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
  
 0.950
AEX85391.1
P-loop ATPase, MinD superfamily; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S binding domain.
 
  
 0.950
AEX85387.1
PFAM: 4Fe-4S binding domain.
 
  
 0.811
AEX86443.1
Hypothetical protein; PFAM: Dinitrogenase iron-molybdenum cofactor.
 
     0.790
AEX85388.1
Hypothetical protein; PFAM: Dinitrogenase iron-molybdenum cofactor.
       0.785
AEX86423.1
Metal-dependent hydrolase, beta-lactamase superfamily II; PFAM: Metallo-beta-lactamase superfamily.
 
     0.711
AEX85386.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.
  
    0.703
AEX85708.1
PFAM: Protein of unknown function DUF89.
 
     0.492
AEX85392.1
Hypothetical protein.
       0.484
AEX85393.1
Hypothetical protein.
       0.484
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.