STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85444.1PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family. (286 aa)    
Predicted Functional Partners:
AEX85782.1
PFAM: DAK2 domain; TIGRFAM: DAK2 domain fusion protein YloV.
 
 0.992
AEX85443.1
PFAM: Bacterial regulatory proteins, lacI family; family.
       0.773
AEX85442.1
Beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; PFAM: Glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
       0.697
AEX85445.1
Hypothetical protein; Manually curated.
       0.697
AEX85440.1
PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
       0.678
AEX85441.1
PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
       0.678
AEX85438.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.668
AEX85439.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.668
AEX85437.1
ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.455
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.