STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85519.1ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein. (437 aa)    
Predicted Functional Partners:
AEX85517.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.990
AEX85518.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.989
AEX85500.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.872
AEX85499.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.838
AEX85430.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.819
AEX86441.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.800
AEX85431.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.764
AEX86440.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.759
AEX85464.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
      0.661
AEX85251.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.639
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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