STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85531.1ABC-type cobalt transport system, permease component CbiQ; PFAM: Cobalt transport protein. (263 aa)    
Predicted Functional Partners:
AEX86147.1
ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.
 0.999
AEX86148.1
ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.
 0.999
AEX85869.1
Hypothetical protein; PFAM: BioY family.
 
 0.973
AEX85525.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1393).
 
 
 0.891
truA
Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.876
AEX85342.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
    
 0.658
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
 
     0.592
adk
Adenylate kinase family protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
  
 0.523
AEX85532.1
Hypothetical protein.
       0.508
potA-2
Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
  
 0.492
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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