STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85627.1Uncharacterized protein involved in exopolysaccharide biosynthesis; PFAM: Chain length determinant protein. (599 aa)    
Predicted Functional Partners:
AEX85098.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
 
 
 0.957
AEX85855.1
Putative nucleoside-diphosphate sugar epimerase; PFAM: C-methyltransferase.
 
  
 0.770
AEX84812.1
PFAM: Predicted membrane protein (DUF2238).
 
     0.732
AEX85626.1
Capsular polysaccharide biosynthesis protein; PFAM: PHP domain.
     
 0.725
AEX85785.1
TIGRFAM: RecB family nuclease, putative, TM0106 family.
  
     0.723
AEX85628.1
Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase.
 
  
 0.716
AEX85603.1
PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.715
AEX85646.1
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP.
  
  
 0.715
AEX84643.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
 
  
 0.713
AEX85625.1
Capsular exopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
0.711
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.