STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85743.1Hypothetical protein. (412 aa)    
Predicted Functional Partners:
AEX85741.1
Hypothetical protein.
       0.775
AEX85742.1
Hypothetical protein.
       0.775
AEX85740.1
Hypothetical protein.
       0.577
AEX85913.1
PFAM: Tetratricopeptide repeat.
 
 
 
 0.565
AEX84821.1
PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate carbamoyltransferase regulatory chain, metal binding domain; Aspartate carbamoyltransferase regulatory chain, allosteric domain; TIGRFAM: aspartate carbamoyltransferase, regulatory subunit; aspartate carbamoyltransferase.
 
     0.541
AEX84583.1
PEGA domain-containing protein; PFAM: PEGA domain.
  
   0.531
AEX85915.1
Hypothetical protein.
  
   0.531
AEX86299.1
Hypothetical protein.
  
   0.531
AEX85310.1
PFAM: Major Facilitator Superfamily.
  
     0.507
AEX85744.1
PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family.
       0.492
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.